PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88139.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 234aa    MW: 25543.8 Da    PI: 10.2385
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88139.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.8e-2087136255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+r+++ +g+W+AeIrdp+   k  r++lg+f++aeeAa a+++a+++++g
  OWM88139.1  87 VYRGIRQRP-WGKWAAEIRDPN---KGVRVWLGTFDSAEEAALAYDRAALRIRG 136
                 69*******.**********93...25************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MCGGAIISGF VEIRRGRRCA GGDDFWSDLD AISDLLGLGS SGGADVPHNA TQHAQVPKAK  60
KNRKSAARHV ADENGKGGRA QRAGKNVYRG IRQRPWGKWA AEIRDPNKGV RVWLGTFDSA  120
EEAALAYDRA ALRIRGDKAK LNFSPPPPAP PAPPTPPQLQ AKPHHHPPPA KRRCVHPEPA  180
PSNRHHANWA PELKEQISSL ETFLGLAEAE AVRGGRELAE ELWMLEDLGT HRQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.19e-26ERF family protein