PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM88264.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 531aa MW: 58552.5 Da PI: 4.8282

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM88264.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	100.4	1.7e-31	34	169	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT........................ CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks........................ 74 Fl+k+y++++d+++++++sws ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+Y+ k ++ + OWM88264.1 34 FLSKTYDMVDDPATDSIVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYEPAKADEMLTIGLLgiwrqrlnlkikihtvpfpstach 130 9******************999********************************9999888766444999***********999999 PP ...........XTTSEEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 75 ...........kekiweFkhksFkkgkkellekikrkks 102 +++ weF+++ F +g+k+ll++i r+k OWM88264.1 131 hdvyskgfrkvDPDRWEFANEGFLRGQKHLLKSISRRKP 169 9888877665449*********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MDGANHGGTA EESTSGGGKP TPAPMPSANS PPPFLSKTYD MVDDPATDSI VSWSPTNNSF 60 VVWNPPEFAR DLLPKYFKHN NFSSFVRQLN TYEPAKADEM LTIGLLGIWR QRLNLKIKIH 120 TVPFPSTACH HDVYSKGFRK VDPDRWEFAN EGFLRGQKHL LKSISRRKPA HGQSNQQSVQ 180 SHGQSSSVGA CVEVGKFGLE EEVERLKRDK NVLMQELVRL RQQQQATDGQ LQTMVQRLHG 240 MEQRQQQMMS FLAKAMQNPG FLAQFVQQQN EGGRRISEAN KKRRLRQEGI SESEPTGTPD 300 GQIVKYQPLV NEAAKMFKQF MKAEASPRIE SFDKNPDSFL LGDGSSSSVG VDCGSSSSRI 360 SSVTLQEVPP TSGQMSCMPA VSEVQSSPPT GQFPGMGAMV GQQDSKGTSS IPQADIAMPE 420 LSQIPDVTPE SIIDLPGDDF LDPAQFVMDG PVPLDIDVIP TDPDIDSFLE NSAFWEDILE 480 QSPVPDDESP SVEGNPRESD GCPKENGWDK TQHMDQLTEQ MGLLTSNTKR V

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MDGANHGGTA EESTSGGGKP TPAPMPSANS PPPFLSKTYD MVDDPATDSI VSWSPTNNSF  60
VVWNPPEFAR DLLPKYFKHN NFSSFVRQLN TYEPAKADEM LTIGLLGIWR QRLNLKIKIH  120
TVPFPSTACH HDVYSKGFRK VDPDRWEFAN EGFLRGQKHL LKSISRRKPA HGQSNQQSVQ  180
SHGQSSSVGA CVEVGKFGLE EEVERLKRDK NVLMQELVRL RQQQQATDGQ LQTMVQRLHG  240
MEQRQQQMMS FLAKAMQNPG FLAQFVQQQN EGGRRISEAN KKRRLRQEGI SESEPTGTPD  300
GQIVKYQPLV NEAAKMFKQF MKAEASPRIE SFDKNPDSFL LGDGSSSSVG VDCGSSSSRI  360
SSVTLQEVPP TSGQMSCMPA VSEVQSSPPT GQFPGMGAMV GQQDSKGTSS IPQADIAMPE  420
LSQIPDVTPE SIIDLPGDDF LDPAQFVMDG PVPLDIDVIP TDPDIDSFLE NSAFWEDILE  480
QSPVPDDESP SVEGNPRESD GCPKENGWDK TQHMDQLTEQ MGLLTSNTKR V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-125	HSF family protein