PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88287.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 249aa    MW: 27391.4 Da    PI: 8.2224
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.0001292114123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C+ C + F++   L  H+++H
  OWM88287.1  92 YTCTFCRREFRSAQALGGHMNVH 114
                 9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MVTINKSSMA AELGLVSLTQ LQQQLLLSAA HSQPDTSSTG DRSSSWMWNP NPSPKHQQPG  60
GLLEEKDDSW EVRAFAEDTG SIMGTTWPPR SYTCTFCRRE FRSAQALGGH MNVHRRDRAR  120
LHQTQYSPTG RPCSFPTTSN STTPPPPLII SNQDFAAQRG LCLLYQLPNP NGFISTRTIN  180
NNTCLDSSSP STLLSISAYR PNTNSSSNSP RSEAETSSDE GTKMKKSNNI SKESSVEIDL  240
ELRLGQRPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.12e-32C2H2 family protein