PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88292.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 334aa    MW: 37270.4 Da    PI: 5.9868
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.42.9e-5361331128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 lppGfrFhPtdeelv +yLk+kveg ++el evi+ +d+yk++Pw+Lp k  + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkd++v++ ++
  OWM88292.1   6 LPPGFRFHPTDEELVGYYLKRKVEGLDFEL-EVIPVIDLYKFDPWELPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVC-RS 102
                 79****************************.99**************95344555788**************************************.99 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ g +ktLvfy+grap g +t+Wvmheyrl
  OWM88292.1 103 SVWGYRKTLVFYQGRAPLGDRTSWVMHEYRL 133
                 99***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MGGASLPPGF RFHPTDEELV GYYLKRKVEG LDFELEVIPV IDLYKFDPWE LPEKSFLPKR  60
DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKVVC RSSVWGYRKT LVFYQGRAPL  120
GDRTSWVMHE YRLCDDDPSH QGTPNFLGAF ALCRVIKKNA NTQKTSDSSG EPVKGKRVVS  180
NFGNTSAEIS NEPPSAFLDT SPQGSCYSSP LPSPHETGPV PDFGPASHPE SFWVSPDLIL  240
DSSKEYSRVQ EMAPAFFRSS EIPSPMSSWR PYEHQEISPC SSFSNFTGEA DVALPGDFSQ  300
FGYTNGNFTG LDGSGGSAYD SYDLASSLRN SNLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.11e-107NAC family protein