PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88299.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ARR-B
Protein Properties Length: 578aa    MW: 64187.4 Da    PI: 6.4724
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88299.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.72.3e-27344396255
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  +++Wt+eLH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR+
  OWM88299.1 344 LKVDWTSELHKKFVQAVEQL-GVDQAIPSRILELMKVQGLTRHNVASHLQKYRM 396
                 5899****************.********************************8 PP
2Myb_DNA-binding43.47.7e-14346395248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WT e+++++v+av+qlG +   +++I + m  +g+t+ ++ s++qky+
       OWM88299.1 346 VDWTSELHKKFVQAVEQLGVDqaIPSRILELMKvQGLTRHNVASHLQKYR 395
                      57***********************************************7 PP
3Response_reg23.72.4e-09201261109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+ d + + +  l+  le  +y  v  + d  eal  + +k   +++ ++ ++ ++   +e +k ++++  +lp i+v++    +++ +++ +Ga 
    OWM88299.1  20 VLLLDRDSTSAAELKAKLEAMDY-TVSIFCDENEALSAVANKCetFHVAIVEVSSSN--SSESFKFLETAR-DLPTIMVSDVHCLNTTMKCIALGAV 112
                   67788888888999999******.***************776666*****9977776..455555565554.699********************** PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   +fl Kp  +++l++
    OWM88299.1 113 EFLHKPLCENKLRN 126
                   ******99999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 578 aa     Download sequence    
MVCTANDLQG WKDFPKGLRV LLLDRDSTSA AELKAKLEAM DYTVSIFCDE NEALSAVANK  60
CETFHVAIVE VSSSNSSESF KFLETARDLP TIMVSDVHCL NTTMKCIALG AVEFLHKPLC  120
ENKLRNIWQH VVHKNGTALD FSMSILSSLF PFDGTKYGPS FVHCQDENSE FMNLEQAFNA  180
GVGIVSESLK PVKESLVSML QLPIENGEVK KAASADTENV SVHEPSTPQL KRGAPFIDDG  240
DCLQEQTHCS TEKGNGEQDV ESKSVETTCN NLTAKIDRTE HRSVKEASVK VEDESGDNNS  300
KSESSISPLA QAKDDSHGSH DCANNTAKSS CLQTSAGKVN RKKLKVDWTS ELHKKFVQAV  360
EQLGVDQAIP SRILELMKVQ GLTRHNVASH LQKYRMNRRH ILPKEDDRRW PQHRDMVPRS  420
YYPHRPIMAF PPYHSNHLAY PVWGVQGNHQ PGMQFWGPPS YPPWQPAENW QWKPYPGLHA  480
DAWGCPVMPP AQGPGFPFPQ DGSGYHCAGA VHNVPQQSSF ELHQAEEVVD KAVKEAINKP  540
WLPLPLGLKP PSTEGVLAEL SRQGIPCIPP RLNGTEQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-132ARR-B family protein