PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88344.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 294aa    MW: 32086.1 Da    PI: 9.0826
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88344.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.2e-21139190155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr+++ +g+++AeIrdp   + k  r++lg+++ta eAa+a+++a+ kl+g
  OWM88344.1 139 PHYRGVRQRP-WGKFAAEIRDP---NrKGSRVWLGTYDTAIEAARAYDRAAFKLRG 190
                 68********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MAAATSSELS TQLLLIKQYL LGEPSPVGGA AFSSDFLMTS DPLSFSEDFD STADLLFGFN  60
AKPHAIAMTA PKASESSSPS SSGSNSSFEF DSKTLRSDST SRPKKPSLKI SLPSKVEWLH  120
FGEPDRAVAV QDHLEDRRPH YRGVRQRPWG KFAAEIRDPN RKGSRVWLGT YDTAIEAARA  180
YDRAAFKLRG SKAILNFPLE AGKSEPVAAH CGGAKRRREA GDRNGRAEAE LITTKKNKIE  240
LSQTDVINQF RDAPLTPSCW TAVWDSDTNG VFNVPPLSPL SPHPPLGFPQ LTVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.13e-37ERF family protein