PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88432.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 248aa    MW: 26772.8 Da    PI: 5.0757
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88432.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.1e-184292155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  OWM88432.1 42 KKYKGVRMRS-WGSWVSEIRAP---NQKARIWLGSYSTPESAARAYDAALLCLKG 92
                59*****998.**********9...336************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MVRVEQHKIQ SPSAEPFSRS KDKGLGKAAA SPSIDKKNMK MKKYKGVRMR SWGSWVSEIR  60
APNQKARIWL GSYSTPESAA RAYDAALLCL KGGSAAGLNF PVDNVHHYPC ETLMSPKSIQ  120
RVAAAAANGI YGNAAASTES PVSSPSISTA SCSSSSSSSP SSPANQQDDH ETLPTTDLPP  180
SSATMSCDID DCLMQSLVTW TDFNYTLPWP ELYFEDESFI SGAALDPTVL LDDSPYEDGS  240
DIRLWSFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.16e-33ERF family protein