PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88456.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 137aa    MW: 16161.8 Da    PI: 7.9471
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88456.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.78.9e-1814101196
                 EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 ffkvl+ + ++   rl lp +f++e+ +   + + t++l+   g sW+vk+  +    ++++tkGW +Fvk+ +L++ Df++F l+  +ef  +v +
  OWM88456.1  14 FFKVLIDKPST---RLKLPPPFVRENiQ--WNLHETISLKKDLGVSWKVKM--EEDETGCYFTKGWVKFVKDMRLEVWDFLIFWLICAKEF--KVAF 101
                 67777444333...588*********63..336679***************..999999**************************998888..5544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MAEEETEPKH SPSFFKVLID KPSTRLKLPP PFVRENIQWN LHETISLKKD LGVSWKVKME  60
EDETGCYFTK GWVKFVKDMR LEVWDFLIFW LICAKEFKVA FYGKNSCERD ISYYASCGTR  120
HSSKLLVFIS DLIAELR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.18e-12B3 family protein