PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM88533.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 381aa MW: 41993 Da PI: 6.0462

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM88533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.2	9.8e-51	6	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhP+d+elv++yL kv + + + + evd++k+ePwd+p+ + + kewyf+s+rd+kyatg r+nrat+sgyWkatgkd+++++ k OWM88533.1 6 LPPGFRFHPKDDELVCDYLMGKVVVADpQDSPQLmMIEVDLNKCEPWDIPEIACVGGKEWYFYSQRDRKYATGLRTNRATASGYWKATGKDRPIYR-KA 103 79******************877663333344499*********7666689***********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +lvg++ktLvfy+grapkg+ktdWvmhe+r+ OWM88533.1 104 ALVGMRKTLVFYQGRAPKGRKTDWVMHEFRI 134 9**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MVEAKLPPGF RFHPKDDELV CDYLMGKVVV ADPQDSPQLM MIEVDLNKCE PWDIPEIACV 60 GGKEWYFYSQ RDRKYATGLR TNRATASGYW KATGKDRPIY RKAALVGMRK TLVFYQGRAP 120 KGRKTDWVMH EFRIEGPLGP PKITSLKEDW VLCRVSFKNR EVASKPSYFG LDRGTPSDLP 180 PLMDSAYISF DSMMATQTQQ QPAGNDVTSE YDDDEQVPCF SSILFSQLPH PISFPQLEFL 240 NAVPTTKSSS GTTDVNYVSS APLAAASSFI GSSISSSSSS AMAVDHHQLG LGGSCILDSR 300 NYYYNSSSSS NNNNNSYSSS SDKKVLKAVL NQLTEMEANS INNNNVSLGD GTSSAESFMS 360 EVGMPATAAC SHHHDLVWAH Y

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MVEAKLPPGF RFHPKDDELV CDYLMGKVVV ADPQDSPQLM MIEVDLNKCE PWDIPEIACV  60
GGKEWYFYSQ RDRKYATGLR TNRATASGYW KATGKDRPIY RKAALVGMRK TLVFYQGRAP  120
KGRKTDWVMH EFRIEGPLGP PKITSLKEDW VLCRVSFKNR EVASKPSYFG LDRGTPSDLP  180
PLMDSAYISF DSMMATQTQQ QPAGNDVTSE YDDDEQVPCF SSILFSQLPH PISFPQLEFL  240
NAVPTTKSSS GTTDVNYVSS APLAAASSFI GSSISSSSSS AMAVDHHQLG LGGSCILDSR  300
NYYYNSSSSS NNNNNSYSSS SDKKVLKAVL NQLTEMEANS INNNNVSLGD GTSSAESFMS  360
EVGMPATAAC SHHHDLVWAH Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	2e-98	NAC family protein