PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM88563.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

DBB

Protein Properties

Length: 294aa MW: 31384.2 Da PI: 6.756

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM88563.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18	5.8e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C ++ H H++vpl OWM88563.1 4 QCNVCEAVEASVLCCADEAALCWACDEKVHAAnklaskHQRVPL 47 7****99*******************66899999999986 PP
2	zf-B_box	27.9	4.9e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + +kC+ ++e +fC +++ llC++C +++H H OWM88563.1 53 QIPKCDICQEAAGFFFCLEDRALLCRKCDVAIHTAnvyvsaH 94 779*****99999****************555666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MKIQCNVCEA VEASVLCCAD EAALCWACDE KVHAANKLAS KHQRVPLYTS SSQIPKCDIC 60 QEAAGFFFCL EDRALLCRKC DVAIHTANVY VSAHRRFLLT GVKVGLDPAE PGPSSSSVNS 120 QSGGKISETK STSASKGVAQ LPLSGDHNGA LPMRQDAARN FVSGKVPLSG GSVAGSIQQW 180 NLDDLLGFTE YNHAYSYMDN GSSKADSGKL GDSDCSSMQR TSEEGEDECP GQVPENSWAV 240 PQIPSPPTAS GLYWPKTPRH ISNGAVSVPD ICSLPEHATP FQRGGNALKR RRHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	3e-94	DBB family protein