PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88633.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family HD-ZIP
Protein Properties Length: 216aa    MW: 24774.4 Da    PI: 7.5026
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88633.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.81.9e-182576556
                SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                 ++t++q++ Le+ F ++++++ e++ +LA +lg++ rqV +W+qN+Ra++k
  OWM88633.1 25 KRLTEDQVRLLEKSFSSTKKLDPERKLQLAGELGVPPRQVAIWYQNKRARWK 76
                5689***********************************************9 PP
2HD-ZIP_I/II110.51.1e-3523114293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  k +rl+++qv+lLE+sF++++kL+perK +la eLg+ prqva+W+qn+RAR+kt+ lE dy+aL+ ++++  +e++ Le++ve+L++el++
   OWM88633.1  23 KGKRLTEDQVRLLEKSFSSTKKLDPERKLQLAGELGVPPRQVAIWYQNKRARWKTQTLEIDYNALQVKLESALSEKRGLERDVERLQAELRK 114
                  779*************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MDFYETQKQR TAVHRQSSSS RHKGKRLTED QVRLLEKSFS STKKLDPERK LQLAGELGVP  60
PRQVAIWYQN KRARWKTQTL EIDYNALQVK LESALSEKRG LERDVERLQA ELRKARDMLA  120
LTGLNQQVQE PNNNYDINTT NTTNNVISCS NNASGSCEEG GGSSSNNSFI INGDQRQHHR  180
HVSCCWEEEE ENNKNLHLDD LYACVMFANG PTRSDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53980.13e-36HD-ZIP family protein