PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88637.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 166aa    MW: 19320.9 Da    PI: 9.2044
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88637.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.87.2e-56211491129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 lppGfrFhPtdeel+++yL kkv +++++  ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ + +
  OWM88637.1  21 LPPGFRFHPTDEELITYYLLKKVLDSSFSG-RAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSkTCS 118
                 79*************************999.89***************99999****************************************974556 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrle 129
                 lvg+kktLvfy+grapkgek+ Wvmheyrle
  OWM88637.1 119 LVGMKKTLVFYRGRAPKGEKSCWVMHEYRLE 149
                 7****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MESYLYPQHL DNNNGGDSGH LPPGFRFHPT DEELITYYLL KKVLDSSFSG RAIAEVDLNK  60
CEPWELPEKA KMGEKEWYFF SLRDRKYPTG LRTNRATEAG YWKATGKDRE IYSSKTCSLV  120
GMKKTLVFYR GRAPKGEKSC WVMHEYRLEG KFAYHYLSRS SKACAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.11e-97NAC family protein