PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88641.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 208aa    MW: 22241.1 Da    PI: 10.5428
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.88.7e-212474256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr ++ +gr++AeIrdp   gk++r++lg+f+taeeAa+a++aa+++++g+
  OWM88641.1 24 RYRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAARAYDAAAREFRGA 74
                59*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MAPRERPAAT AAANPNPHAG KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA  60
ARAYDAAARE FRGAKAKTNF RTDAELLSAR SPSQSSTIDS ASPPPPPPLD LSLGGAPAGQ  120
YFPGTPAVCF PVGRPVFFFD AFARAEKVNS NINLEACRFD RPALSGFRPV GRGVSGAAES  180
GASPAVGPRR KPFLNLELDL NLPAPEVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.15e-28ERF family protein