PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM88674.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 355aa MW: 39547.3 Da PI: 9.1241

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM88674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.8	1.8e-52	14	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrF Ptdeel+v+yL++kv+g++++l ++i ++d+yk++PwdLp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ +g+ OWM88674.1 14 LPPGFRFYPTDEELLVQYLCRKVAGHHFNL-QIIGDIDLYKFDPWDLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITT-EGRR 110 79**************************.89***********7777799*********************************99.9999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy g+apkg+kt+W+mheyrl OWM88674.1 111 VGIKKALVFYIGKAPKGTKTNWIMHEYRL 139 *************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MGVPATDPLT QLSLPPGFRF YPTDEELLVQ YLCRKVAGHH FNLQIIGDID LYKFDPWDLP 60 SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITTEGRR VGIKKALVFY 120 IGKAPKGTKT NWIMHEYRLL ETSRRAGSTK LDDWVLCRIY KKNSSSQNPV IISTGGPVSS 180 KEHSHASSSS SSSLDDMLES LPEIDDRFFA LPRMNSLKAV QHHQQQQPHE QKPNLQSLSS 240 GAFDWATLAG LSSGTELNQA QAHAQAQAQA QAQAQPQVAN YANSNDVYVP AADATQQRRL 300 GNSTLDEEVQ SGLRTHQHVG MFQQTPGLLT QSMTSPIDTF GYRYPAKSVG FGFHQ

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MGVPATDPLT QLSLPPGFRF YPTDEELLVQ YLCRKVAGHH FNLQIIGDID LYKFDPWDLP  60
SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITTEGRR VGIKKALVFY  120
IGKAPKGTKT NWIMHEYRLL ETSRRAGSTK LDDWVLCRIY KKNSSSQNPV IISTGGPVSS  180
KEHSHASSSS SSSLDDMLES LPEIDDRFFA LPRMNSLKAV QHHQQQQPHE QKPNLQSLSS  240
GAFDWATLAG LSSGTELNQA QAHAQAQAQA QAQAQPQVAN YANSNDVYVP AADATQQRRL  300
GNSTLDEEVQ SGLRTHQHVG MFQQTPGLLT QSMTSPIDTF GYRYPAKSVG FGFHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	1e-121	NAC family protein