PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM88675.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 349aa MW: 38342.1 Da PI: 8.7008

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM88675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.1	2e-54	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLkkk+++++l++ +i+evdiyk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vls+ +++ OWM88675.1 16 LPPGFRFHPTDEELVVHYLKKKAASSPLPV-LIIAEVDIYKFDPWELPAKATYGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLSSnGNQ 113 79**************************.77***********8888899**********************************996778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy g+ pkg kt+W+mheyrl OWM88675.1 114 KVGVKKALVFYGGKPPKGMKTNWIMHEYRL 143 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MESTDSSAGT SQQPQLPPGF RFHPTDEELV VHYLKKKAAS SPLPVLIIAE VDIYKFDPWE 60 LPAKATYGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPVLSSN GNQKVGVKKA 120 LVFYGGKPPK GMKTNWIMHE YRLAENKAIN KPPGCDLGNK KNSLRLDDWV LCRIYKKNNS 180 HRPIDHDKDD SSMDDILESI PHPSLTVGGS QGLRFHSLPR SVTAPFGAVF ENHQSTFDSM 240 MANNGSGNGC IGTMQNLPLK RTLPSLYWDE KDIVAEPSLG KRSFGVDIGS DSTVERTTEG 300 NNSGSISSLL GQIPGGAASP SLQPQSGLGS IGENVFRPPY QLPGLNWYT

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MESTDSSAGT SQQPQLPPGF RFHPTDEELV VHYLKKKAAS SPLPVLIIAE VDIYKFDPWE  60
LPAKATYGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPVLSSN GNQKVGVKKA  120
LVFYGGKPPK GMKTNWIMHE YRLAENKAIN KPPGCDLGNK KNSLRLDDWV LCRIYKKNNS  180
HRPIDHDKDD SSMDDILESI PHPSLTVGGS QGLRFHSLPR SVTAPFGAVF ENHQSTFDSM  240
MANNGSGNGC IGTMQNLPLK RTLPSLYWDE KDIVAEPSLG KRSFGVDIGS DSTVERTTEG  300
NNSGSISSLL GQIPGGAASP SLQPQSGLGS IGENVFRPPY QLPGLNWYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-119	NAC family protein