PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88809.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 158aa    MW: 17564 Da    PI: 7.7837
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88809.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.20.00071121146630
                 HHHHHHHHHHHHHHHHHHHCTSCC.C CS
         HLH   6 nerErrRRdriNsafeeLrellPk.a 30 
                 + +E  R ++++++f+ Lr  +P+ +
  OWM88809.1 121 PTNEMERQSHMKERFNDLRMKIPNfP 146
                 678999*****************955 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MPRVFDTIDN EVRGFGALPN TPFPSTSAIS NHFTLQPQSV PLLFPSMRTV HEMTFNLTSQ  60
LGLHCAPPLA LVREMFQSLP LSGDGGEHDV AGEGREEGLV QVQNGGASKL KGGRNGTKQQ  120
PTNEMERQSH MKERFNDLRM KIPNFPKVWT SILTHQIQ