PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM88894.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

DBB

Protein Properties

Length: 221aa MW: 24736 Da PI: 6.6857

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM88894.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.3	2.4e-06	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ + fC ++ lC +C ++ H OWM88894.1 4 LCDACESAAAAVFCAADEAALCLSCDEKVH 33 7**************************998 PP
2	zf-B_box	26.6	1.3e-08	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + ++C+ +e+ ++ ++Ce +++ lC +C + H g H OWM88894.1 52 DVPRCDICENAPAFFYCEIDGTSLCLQCDMIVHVGgkrtH 91 5799**************************9996545555 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MRTLCDACES AAAAVFCAAD EAALCLSCDE KVHMCNKLAS RHVRVGLANP SDVPRCDICE 60 NAPAFFYCEI DGTSLCLQCD MIVHVGGKRT HGRYLLLRQR VEFPGDKSSH HEEPAVPSME 120 PGEARRGHPQ NQNLKPTMEE NHQNHRESAL RAPNTSDTEK LGKRDSKMID LNMKPHRMHE 180 QASFNEDDCW LVFRHPFAAL AIAMYSYFPV KSSLHDPQSS G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	1e-58	DBB family protein