PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM89255.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family DBB
Protein Properties Length: 253aa    MW: 26641.8 Da    PI: 4.9078
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM89255.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box20.97.5e-071252437
    zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......H 37
                + C+ +++  +  fC+ +   lC  C +  H +       H
  OWM89255.1 12 KPCDSCKSAAAAVFCRVDAAALCFGCDTRLHARsapsthhH 52
                68*****************************8888888544 PP
2zf-B_box28.43.4e-0955100342
    zf-B_box   3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 
                  ++C+ +e+ ++   C+ +   lC +C + +H+       H++vp+
  OWM89255.1  55 VWMCEVCEQAPAAVTCKADAAALCVSCDTDIHSAnplaqrHERVPV 100
                 689*****************************66899999*99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MGFGSGWSVA AKPCDSCKSA AAAVFCRVDA AALCFGCDTR LHARSAPSTH HHERVWMCEV  60
CEQAPAAVTC KADAAALCVS CDTDIHSANP LAQRHERVPV QPFFDSAESF MKSSALSFLI  120
LPGDEAAAAT AAAGGAETGG AGAHDHDGEA EMDKWLLPNL NSCSKVMPGA DMGGFFSEMD  180
PFIDFGFGDP VDRFQGIGSD GLVPVQAKPI PIPAGKQSSE SRLDIDFSRP NNRIASSFSY  240
LTNSLSHSVS TFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57660.12e-53CO-like family protein