PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM89305.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WOX
Protein Properties Length: 254aa    MW: 28274.5 Da    PI: 6.7002
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM89305.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.48.1e-212685357
                --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                +R+++tkeq+e+Le l+++  r+p+ae++++++ +l    +++ ++V++WFqN++a++++
  OWM89305.1 26 SRWNPTKEQIEILEGLYKQgIRTPTAEQIQQITGRLraygHIEGKNVFYWFQNHKARQRQ 85
                6*****************99**************************************97 PP
2Wus_type_Homeobox115.52.5e-372586364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                        +RW+Pt+eQi+iLe lyk+G+rtP++e+iq+it +L++yG+ie+kNVfyWFQN+kaR+rqk
         OWM89305.1 25 ASRWNPTKEQIEILEGLYKQGIRTPTAEQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQK 86
                       58***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MESGTCGSNE AGELGGSSGA AAAGASRWNP TKEQIEILEG LYKQGIRTPT AEQIQQITGR  60
LRAYGHIEGK NVFYWFQNHK ARQRQKEKQE SLAFLSRYFH HRSGSAAAAA VAAFPSPCPN  120
VICGPCYMPP SELGFYQIHQ KVLIPCGYKR RQRSDYGESF DPRSQKPHNY PNLQNQCSEF  180
TKREESNIGM SSDCDHDMTL RTLDLFPLHP TGIVDGNARE TLDVPAGSSE VLEDSNEQQN  240
LVYIDFFSGN KNCC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.17e-47WOX family protein