PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM89315.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 180aa    MW: 19679.8 Da    PI: 9.4457
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM89315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.00134971123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C+ C++ F++   L  H  +H
  OWM89315.1 49 FTCKTCNREFPSFQALGGHRASH 71
                89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MKRERSGEVQ YDGEVIDHES MDDMAKCLML LSKVGSNDTK LQGPPRRVFT CKTCNREFPS  60
FQALGGHRAS HKKPRMLTDP ALHSEGAEVA SKPKTHECSI CGLEFPIGQA LGGHMRRHRG  120
ELAAAAPAAA PPSQRVPVLK KSASSKRVTT WCLDLNLSPL ENDLRMILLG KAAPPINFVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.12e-42C2H2 family protein