PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM89354.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WOX

Protein Properties

Length: 225aa MW: 25732.1 Da PI: 9.0024

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM89354.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.5	7.2e-21	7	66	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 R+++t+eql +Lee+++ r+psa+++++++++l +++ ++V++WFqN++a++++ OWM89354.1 7 ARWCPTPEQLMILEEMYRTgVRTPSASQIQQITAHLslygKIEGKNVFYWFQNHKARDRQ 66 7***************99***********************************996 PP
2	Wus_type_Homeobox	119.2	1.8e-38	5	67	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 a++RW+PtpeQ++iLee+y++G+rtP++++iq+ita+L+ yGkie+kNVfyWFQN+kaR+rqk OWM89354.1 5 ASARWCPTPEQLMILEEMYRTGVRTPSASQIQQITAHLSLYGKIEGKNVFYWFQNHKARDRQK 67 679***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MSPAASARWC PTPEQLMILE EMYRTGVRTP SASQIQQITA HLSLYGKIEG KNVFYWFQNH 60 KARDRQKLRR KLTKQLQQQQ QQQQQQQQLF QQHLSPGCSF CPIYLDHHQC PASASAFRQL 120 SCYNLPPSPP LASLSYPPQG GNIGGAESRS TMEYNSWRRE IIGNDHQKAD MEKSVMKMYS 180 GGWMMVVDVD SSDRCPARPL QTLQLFPTTS TNLREDRENA TVQPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	2e-37	WOX family protein