PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM89369.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 370aa MW: 40056.5 Da PI: 8.7792

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM89369.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.4	2.9e-32	217	272	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+++LH+rF++a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ OWM89369.1 217 KQRRCWSSDLHRRFLHALQQLGGPHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 272 79****************************************************97 PP
2	Myb_DNA-binding	42	2.2e-13	219	270	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ +++ ++++a +qlGg+ t+k I + m g+t ++ks++qky+ OWM89369.1 219 RRCWSSDLHRRFLHALQQLGGPhvaTPKQIRELMKvDGLTNDEVKSHLQKYR 270 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MECPEKMRSY MEALEEEQRK IQVFRRELPL CLDLVTKAIE ACKHQLSETA TVTTTTNTST 60 EGMNGQVSEC SQQNSMKGPV LEEFIPIKKT SSFDDHMEHD DDDVAEQHSN NYGSDNDKKK 120 SNWLKSVQLW NPNPEATPRE DSPPPPKRGS VSDGKTTGAF LPFLNGEKSA GKSSPSSGRA 180 VSPLLPAAAA STSSTAERGG GEAGNREEKQ KAGTQRKQRR CWSSDLHRRF LHALQQLGGP 240 HVATPKQIRE LMKVDGLTND EVKSHLQKYR LHAKNSPPQN SANAQPPQFV VVGGIWVPSP 300 QPQYAAAAAA ATSPGPARGT YAPVAAAISI RAAQAQQKYR GSSSSKDQDE ARGSSNSAST 360 SFSARTVTVC

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MECPEKMRSY MEALEEEQRK IQVFRRELPL CLDLVTKAIE ACKHQLSETA TVTTTTNTST  60
EGMNGQVSEC SQQNSMKGPV LEEFIPIKKT SSFDDHMEHD DDDVAEQHSN NYGSDNDKKK  120
SNWLKSVQLW NPNPEATPRE DSPPPPKRGS VSDGKTTGAF LPFLNGEKSA GKSSPSSGRA  180
VSPLLPAAAA STSSTAERGG GEAGNREEKQ KAGTQRKQRR CWSSDLHRRF LHALQQLGGP  240
HVATPKQIRE LMKVDGLTND EVKSHLQKYR LHAKNSPPQN SANAQPPQFV VVGGIWVPSP  300
QPQYAAAAAA ATSPGPARGT YAPVAAAISI RAAQAQQKYR GSSSSKDQDE ARGSSNSAST  360
SFSARTVTVC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	1e-74	G2-like family protein