PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM89458.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

YABBY

Protein Properties

Length: 123aa MW: 13375.3 Da PI: 8.9124

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM89458.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	58.6	2.8e-18	11	56	4	49
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvn 49 ss+++Cyv+CnfCnt+lav +P + +++vtv+CGhC++l ++ OWM89458.1 11 PPSSDHLCYVRCNFCNTVLAVGIPCKRTLETVTVKCGHCSNLSFLS 56 5789*************************************86554 PP
2	YABBY	31.6	5.3e-10	84	123	96	134
YABBY 96 vsseklsenedeevprvpp.virPPekrqrvPsaynrfik 134 ss++ s++++ ++p++ p v +PPek+ r Psaynrf+k OWM89458.1 84 SSSSSSSTSSEPQSPKAAPfVAKPPEKKHRLPSAYNRFMK 123 233334667777888887779*****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 123 aa Download sequence
MEDKGPLDSV PPSSDHLCYV RCNFCNTVLA VGIPCKRTLE TVTVKCGHCS NLSFLSTRPP 60 IQGQCLDHHL SLPGYGTEVR KGQSSSSSSS TSSEPQSPKA APFVAKPPEK KHRLPSAYNR 120 FMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	5e-37	YABBY family protein