PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM89567.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 92aa    MW: 10417.7 Da    PI: 8.5214
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM89567.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.5e-0919591454
                HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                d+i +  ++L++l+P+ + +++s K+s + +L+++++YI+sL
  OWM89567.1 19 DQITDLVSKLQRLVPEiR-NTRSDKVSASKVLQETCNYIRSL 59
                6899999*********77.9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSSRRSRSRQ SGGSRITEDQ ITDLVSKLQR LVPEIRNTRS DKVSASKVLQ ETCNYIRSLH  60
REVDDLSERL SELLASPDTD SDQAAIIRSL LM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.11e-37bHLH family protein