PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM89612.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 214aa MW: 24204.7 Da PI: 6.3877

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM89612.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00022	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F ++ L H++ H OWM89612.1 74 FECQYCFKEFANSQALGGHQNAH 96 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MSGDRSEKLR LFGVELNLSK NELVEGDHES VNSSHSVFSS LQAEDYDKAP KSSSTTRSSC 60 SSSSSEQPNH QKKFECQYCF KEFANSQALG GHQNAHKKER MKKKRLQLQD RKASLSYYYH 120 LQPYGNTDEF TIYDGSTQIS FEPCDPDYHA FSYAPTMWCS LPPNNISFQQ SDSSYMSALD 180 LSERFGANEP IIGPTKQNCK SLDLQLGLCL QTNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10480.1	9e-16	C2H2 family protein