PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM89761.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NF-YC
Protein Properties Length: 137aa    MW: 15337.6 Da    PI: 9.2007
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM89761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC475.7e-1511911897
       NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrt.difdflvdivp 97
                  ++P  r+kki+k d+++ ++ +ea  l++ a + f+  l+ rs   a+e+kr+t+k   +  av+r  ++ dfl+d  p
  OWM89761.1 11 GPDFPTGRVKKIMKLDKEIDKVNSEALFLVTCATQHFLEFLAERSAEVAKEKKRKTVKLEHMRLAVKRHrQTSDFLLDSLP 91
                5689**************************************************************9862689*****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MADEETPETT GPDFPTGRVK KIMKLDKEID KVNSEALFLV TCATQHFLEF LAERSAEVAK  60
EKKRKTVKLE HMRLAVKRHR QTSDFLLDSL PVPSESLDLQ AADKSRSLAV ADKPKPVPAG  120
TRRIDQFFSK PVSDAST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.12e-46NF-YC family protein