PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM89769.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

SBP

Protein Properties

Length: 493aa MW: 54118.4 Da PI: 8.1763

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM89769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.8	2.3e-41	191	268	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls+ak+yhr+h+vCe hsk+p+v+v+g+e+rfCqqCsrfh lsefDe+krsCr+rL++hn+rrrk+++ OWM89769.1 191 CCQVEGCNIDLSSAKDYHRKHRVCESHSKSPKVVVNGVERRFCQQCSRFHGLSEFDENKRSCRKRLSDHNARRRKPHP 268 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MSSLSVMEWN TKHPLQWEWE NLVTSGPKAT DNMKVWQPSE WGIEAEEGMD SGSLYSYRGG 60 SASGGSSGGT SFDPGYTCLS KSSKSPSMNS SSTEEMKFPK FSVEACKGYP EDFSCKRDIA 120 TAELCGASPT LESSVCSGEP LLSLKLGKRT YFEDISDGSN PRASNFPLVA KSPDASAKKM 180 KSTSQNMPAP CCQVEGCNID LSSAKDYHRK HRVCESHSKS PKVVVNGVER RFCQQCSRFH 240 GLSEFDENKR SCRKRLSDHN ARRRKPHPDV AHFNQSRLST IIYGSLQQMN SIYSGVPFEH 300 TKSSVNLTWS NPSTLKFMQT KGDALKPGKA GDVEGNPRHS NKLSNTMRPV TARRDGYELL 360 PLKGTTVKTL DGGSEESLIS SSGLDAPQDL HRALSLLSTD SRDSCKQSKP ALHDMNNVNI 420 PKPCTYGVPQ SLGLPLSSTK YWNMEQWPSN TQRHDLTPQS GGNGSSFGNS NFSECLLPSE 480 GQHLFGFEPV HLN

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MSSLSVMEWN TKHPLQWEWE NLVTSGPKAT DNMKVWQPSE WGIEAEEGMD SGSLYSYRGG  60
SASGGSSGGT SFDPGYTCLS KSSKSPSMNS SSTEEMKFPK FSVEACKGYP EDFSCKRDIA  120
TAELCGASPT LESSVCSGEP LLSLKLGKRT YFEDISDGSN PRASNFPLVA KSPDASAKKM  180
KSTSQNMPAP CCQVEGCNID LSSAKDYHRK HRVCESHSKS PKVVVNGVER RFCQQCSRFH  240
GLSEFDENKR SCRKRLSDHN ARRRKPHPDV AHFNQSRLST IIYGSLQQMN SIYSGVPFEH  300
TKSSVNLTWS NPSTLKFMQT KGDALKPGKA GDVEGNPRHS NKLSNTMRPV TARRDGYELL  360
PLKGTTVKTL DGGSEESLIS SSGLDAPQDL HRALSLLSTD SRDSCKQSKP ALHDMNNVNI  420
PKPCTYGVPQ SLGLPLSSTK YWNMEQWPSN TQRHDLTPQS GGNGSSFGNS NFSECLLPSE  480
GQHLFGFEPV HLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-63	SBP family protein