PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM89783.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 211aa MW: 23437.1 Da PI: 9.6186

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM89783.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.4	6.2e-33	132	190	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg+H h+ OWM89783.1 132 LDDGYRWRKYGQKAVKNNKFPRSYYRCTFQGCNVKKQVQRLTKDEGVVVTTYEGSHSHP 190 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
METYPPMFLS SSSSPPFMAM NMINSHHHHQ ATNKVVDDEL AGGGFLGLMP SMEAQGALSS 60 SNNTSSAEGA STGHNDFRDK GLAFEAGSEV GEPKAAGRRK GDHHQGYGKA ASKGKVRKPR 120 YAFQTRSHVD ILDDGYRWRK YGQKAVKNNK FPRSYYRCTF QGCNVKKQVQ RLTKDEGVVV 180 TTYEGSHSHP IEKSTDNFEH ILSQFQIYTS I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	6e-58	WRKY family protein