PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM89907.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 300aa MW: 34018.3 Da PI: 5.4816

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM89907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.9	2.5e-36	13	105	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 F++k+y++++d+++++li+w + +nsf+v+++ +f++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++ weF++++F +g+k+ll++i OWM89907.1 13 FVMKTYQMVNDPSTDNLITWGRANNSFIVVEPLDFSQRILPAYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANQWFLRGQKHLLSNIV 100 9******************999*************************************999.........****************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ OWM89907.1 101 RRKHS 105 *9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MEATNSSNIV APFVMKTYQM VNDPSTDNLI TWGRANNSFI VVEPLDFSQR ILPAYFKHNN 60 FSSFVRQLNT YGFRKVDPDR WEFANQWFLR GQKHLLSNIV RRKHSRNVQY KSELDMDEEE 120 LLVEIARLRD EQRALEEELK GMNQRLEATE RRPQQMMAFL CKVVEDPDLI PRMILEKDLK 180 ARNQLPSGEK KRRLMINNNP ASSSSSSSMA VSSSIKSEEE DDGAIGVISS PEVGYDMDNF 240 CHSSSPPMPA PLQSYTAVGY SNTPRQGSAG QFGYFAEMGT EEASPRPPPP YPFSLLGGGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24520.1	1e-89	HSF family protein