PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM90167.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 243aa    MW: 25772.9 Da    PI: 7.4461
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM90167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.4e-183585155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++++g
  OWM90167.1 35 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCIKG 85
                59*****998.**********9...336***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MVKSEQKIQS SKLHPTSPTA SSEASPSSVN KNMKKKYKGV RMRSWGSWVS EIRAPNQKTR  60
IWLGSYSTPE AAARAYDAAL LCIKGSSASS SLNFPISSAS YYGIPHDGNP LMSPKSIQRV  120
AAAAAAAATG GSAKALGGAA PPLAPPPPPS LSPSIADSSP SMSYSSPSDQ HDDEVSPACG  180
YDPFWGSHKS EPTSAMDSWC KLESPKYVDL MVNGAALDTA IATNFLMDDF FNEEGDIRLW  240
SFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.17e-31ERF family protein