PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM90316.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 292aa MW: 31901.7 Da PI: 8.0063

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM90316.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.5	7.1e-09	6	50	3	44
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrw 44 +W+ eE++ + +a++++ + +W++Ia+ ++ ++ +++k ++ OWM90316.1 6 AWSREEEKAFENAIAMHWAEdsaeHWDKIASLVP-SKSIEELKQHY 50 7*******************************.********9 PP
2	Myb_DNA-binding	39	1.9e-12	131	175	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++G+g+W++I+r + Rt+ q+ s+ qky OWM90316.1 131 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 175 7***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MSSATAWSRE EEKAFENAIA MHWAEDSAEH WDKIASLVPS KSIEELKQHY EILVEDVRAI 60 EEGKVQIPNY VGEETTSSTK DNKHGVPSGG ASDKRQNCGF GGGFSGLGHD SGGHGGKGGS 120 RSDQERRKGI PWTEEEHRLF LLGLDKFGKG DWRSISRNFV ISRTPTQVAS HAQKYFIRLN 180 SMNRDRRRSS IHDITSVNNG DISAPQAPIT GQQSNTNPSS PALVGPPPKH RNQPHMPGIG 240 MYGTPVGLPV SAPGHMASLM LPPGHHPHHP PYVLPMAYPM PPPLPPPPPM HQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49010.1	6e-72	MYB family protein