PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM90356.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

SBP

Protein Properties

Length: 527aa MW: 57577.1 Da PI: 8.5901

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM90356.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.3	3.8e-42	183	258	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls+ k+yh+rhkvCe+hsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q OWM90356.1 183 CQVYGCNKDLSSSKDYHKRHKVCEAHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 258 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MESSWIYVSE GKGFGSNSES ISPPDSLSRS RNPFPNGELV KTPSCFGNHI LISGGQPPAD 60 MGQRCFGPEL GIQQMIAKQL PSDSGSDVLT GRFGGGRDMT PIMASLNAFS EEDDSTSKFS 120 SSVVDSNSRD SSLIDLKLER FNDIRDHHSS KFSRRGPVLS YPESSAPSKR GRAGGISSQT 180 AYCQVYGCNK DLSSSKDYHK RHKVCEAHSK TAKVIVNGIE QRFCQQCSRF HLLAEFDDGK 240 RSCRKRLAGH NERRRKPQVG AHSGRSGRLL QPFGNRFQGN AFAPTSFICQ DILPNGTNLN 300 PEKYSTHDLY GRIKLEDRAD YGGPLTAIPL PSRHLHSKSP ISPYTNLEKQ FPFAHETGVS 360 SSTSTGIFSG QISASRSFFQ DSTLGSEDFS AFNSASALQG FSESGCALSL LSSPSQNSSS 420 YSLNQVSNKI MSEVPNKLRT SSAIRSGEGN QTSPILISGC ADTVNFEISE GILRAPEVLH 480 EKGKLSCDDG PTISLSQLSS QLHRVEHQRR SMKVKREDDP FFCTRLT

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MESSWIYVSE GKGFGSNSES ISPPDSLSRS RNPFPNGELV KTPSCFGNHI LISGGQPPAD  60
MGQRCFGPEL GIQQMIAKQL PSDSGSDVLT GRFGGGRDMT PIMASLNAFS EEDDSTSKFS  120
SSVVDSNSRD SSLIDLKLER FNDIRDHHSS KFSRRGPVLS YPESSAPSKR GRAGGISSQT  180
AYCQVYGCNK DLSSSKDYHK RHKVCEAHSK TAKVIVNGIE QRFCQQCSRF HLLAEFDDGK  240
RSCRKRLAGH NERRRKPQVG AHSGRSGRLL QPFGNRFQGN AFAPTSFICQ DILPNGTNLN  300
PEKYSTHDLY GRIKLEDRAD YGGPLTAIPL PSRHLHSKSP ISPYTNLEKQ FPFAHETGVS  360
SSTSTGIFSG QISASRSFFQ DSTLGSEDFS AFNSASALQG FSESGCALSL LSSPSQNSSS  420
YSLNQVSNKI MSEVPNKLRT SSAIRSGEGN QTSPILISGC ADTVNFEISE GILRAPEVLH  480
EKGKLSCDDG PTISLSQLSS QLHRVEHQRR SMKVKREDDP FFCTRLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	2e-51	SBP family protein