PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM90407.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Dof

Protein Properties

Length: 445aa MW: 48677.5 Da PI: 8.4088

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM90407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.9	1.3e-39	118	178	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrk+k+s OWM90407.1 118 PDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSA 178 7899*****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MVEAENPAIK LFGKSIKLPS SSPDRVFYPP PPAFDDSEGD EDEETEQDPS EERAILNKRK 60 GDESAVSEEE LISPVTSSDS VNPKTPSIDE ETSKSKGSKT GKDPKDSSKP QEKVLKKPDK 120 ILPCPRCNSM ETKFCYYNNY NVNQPRHFCK ACQRYWTAGG TMRNVPVGAG RRKSKSSASR 180 YRHISISEAL QAAAQVDAAN RTHHHYQNLT PNGTVLTFGL NHYDPVTSPV EKRAANGTRN 240 VSRDFEGQGA AKVSCARVET RDDRSSGNFP IEHSVPNLPG FVPQVPCLNN VPWPYTIPIP 300 FYPTGFWACS NVSIPSPWNF PLLSPPPNQN GLIPGPNSPT LGKRPRDGDV IKADSSAEQD 360 PTKPKKNGSI LIPKTLRIDD PTEAAKSSIW ATLGIKNECG LFRGFQATGK DKGGGRACQT 420 EAEKCRVLCA NPAALSRSLN FHEST

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MVEAENPAIK LFGKSIKLPS SSPDRVFYPP PPAFDDSEGD EDEETEQDPS EERAILNKRK  60
GDESAVSEEE LISPVTSSDS VNPKTPSIDE ETSKSKGSKT GKDPKDSSKP QEKVLKKPDK  120
ILPCPRCNSM ETKFCYYNNY NVNQPRHFCK ACQRYWTAGG TMRNVPVGAG RRKSKSSASR  180
YRHISISEAL QAAAQVDAAN RTHHHYQNLT PNGTVLTFGL NHYDPVTSPV EKRAANGTRN  240
VSRDFEGQGA AKVSCARVET RDDRSSGNFP IEHSVPNLPG FVPQVPCLNN VPWPYTIPIP  300
FYPTGFWACS NVSIPSPWNF PLLSPPPNQN GLIPGPNSPT LGKRPRDGDV IKADSSAEQD  360
PTKPKKNGSI LIPKTLRIDD PTEAAKSSIW ATLGIKNECG LFRGFQATGK DKGGGRACQT  420
EAEKCRVLCA NPAALSRSLN FHEST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	4e-76	Dof family protein