PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM90424.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 96aa    MW: 10721.1 Da    PI: 4.8609
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM90424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.23.9e-0522611454
                HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                d+i++  ++L+el+P++ + +++++   e+L++++ YI+ L
  OWM90424.1 22 DEIRDFVSKLQELIPQLNHRSNGRVP-TEVLKETCSYIQRL 61
                57888899********7688888866.6***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MSGTSRRSAG SPAPSTATLS EDEIRDFVSK LQELIPQLNH RSNGRVPTEV LKETCSYIQR  60
LNREVEELSE KLSKLLDNMG ISSADVELIK TLLDLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.11e-10bHLH family protein