PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM90510.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TALE

Protein Properties

Length: 404aa MW: 45813.5 Da PI: 5.7929

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM90510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.8	8.9e-09	326	382	2	55
T--SS--HHHHHHHHHHHH...HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFe...knrypsaeereeLAkklgLterqVkvWFqNrRake 55 +kR ++ k+ ++L e + k +yp++ ++ LA+++gL+++q+ +WF N+R ++ OWM90510.1 326 KKRGKLPKQARDILLEWWNvhyKWPYPTEVDKVALAESTGLDQKQINNWFINQRKRH 382 5666666666666666655444689*****************************885 PP
2	ELK	30.5	8e-11	305	323	4	22
ELK 4 hqLlrKYsgyLgsLkqEFs 22 + L+rKYsgy++ Lk+EFs OWM90510.1 305 DKLMRKYSGYISALKHEFS 323 78****************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MMEEGMYEIQ YGGTCYGDEP PNHHHHHQQQ PPPLIADGGY NHHPDHREGF PAGSVVYGPG 60 GGPWMQLQPG SSSAAVSDAA SGMVLEAGEE DSLSVAMARA KIAAHPLYPK LLQAYIDCQK 120 VGAPAEVADV LERIRRENED YGTTDNHCLG ADPELDEFME AYHDTLMRYK TDLSRPFEEA 180 TSFLKKIENQ LNTLCSGSST NCASGRFRIG RFNLVMYTML ARGFMPDRWN PSHIIWILVY 240 LLAFKEHACC FTEGSSVADI KLPVGTDDNK EYCCTGDSSE DDDLSGGEID TSECYRTRED 300 RELMDKLMRK YSGYISALKH EFSKKKKRGK LPKQARDILL EWWNVHYKWP YPTEVDKVAL 360 AESTGLDQKQ INNWFINQRK RHWKPSDHMH FSLMESLYGP FIPS

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MMEEGMYEIQ YGGTCYGDEP PNHHHHHQQQ PPPLIADGGY NHHPDHREGF PAGSVVYGPG  60
GGPWMQLQPG SSSAAVSDAA SGMVLEAGEE DSLSVAMARA KIAAHPLYPK LLQAYIDCQK  120
VGAPAEVADV LERIRRENED YGTTDNHCLG ADPELDEFME AYHDTLMRYK TDLSRPFEEA  180
TSFLKKIENQ LNTLCSGSST NCASGRFRIG RFNLVMYTML ARGFMPDRWN PSHIIWILVY  240
LLAFKEHACC FTEGSSVADI KLPVGTDDNK EYCCTGDSSE DDDLSGGEID TSECYRTRED  300
RELMDKLMRK YSGYISALKH EFSKKKKRGK LPKQARDILL EWWNVHYKWP YPTEVDKVAL  360
AESTGLDQKQ INNWFINQRK RHWKPSDHMH FSLMESLYGP FIPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	324	331	KKKKRGKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	4e-44	TALE family protein