PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM90575.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 498aa    MW: 55944.3 Da    PI: 6.969
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM90575.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS358.31.1e-1091254971374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs.el..ykalppsetseknsseelaalklfsevsPilkfshl 96 
                 lv+lL++cAeav+ +d++ a++lL++l+ +a   g+++qR+a++f+++La+rl+  ++ ++  ++a  + +  e +s+++  al l +e++P ++fsh+
  OWM90575.1 125 LVHLLVSCAEAVACRDKAHASTLLSELRVRALVFGSSFQRVASCFVQGLANRLSFLQPlGTvgFSAHYTAKFMEVSSEKKEDALGLVYEICPHIQFSHF 223
                 68***************************************************983331221133334444444457777778888************* PP

        GRAS  97 taNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                 +aN+ Ilea+ege+ vH++D++++    +G QW  L+++La  +++p  +lRiT+vg      + +   +g+ L+ +A+++g+++ef+v v+++ledl+
  OWM90575.1 224 VANSSILEAFEGESFVHVLDLGMTlglpHGHQWRHLIRSLAVHSGPPLlRLRITAVGL----YASKFYVIGQELEIYAKSMGINLEFSV-VESSLEDLQ 317
                 ********************98873333788***********98887789********....99************************9.799****** PP

        GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289
                 ++++ v +gE+l+Vn++lqlh +++es    +   +vL+++++lsPkv+v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ +  r+kvE+++
  OWM90575.1 318 PRDITVYEGEVLVVNSILQLHCVVKESRGALN---SVLQMIRELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKVEQFY 413
                 ************************88877777...8*************************************************************** PP

        GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+++p++  + +qak  l+k +  +gy+v e++g+l+lgW+++p++++S+W+
  OWM90575.1 414 FAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPIK--MIAQAKQWLKKKNiIEGYTVVEDKGCLLLGWNSKPIIAASCWK 497
                 ***************************************97..5679*********9****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    
MVPNPKSDHE LCITDVAPGL DLSLLLETMP PDSTFSFPLD EVRCHKRIRR TYSAGESLSL  60
ARKDGSLCWI GISRSSSTSS LNKLNFRDHI SNYSKRYQVA EAVEDVIESE DDLNREDSSA  120
EAIRLVHLLV SCAEAVACRD KAHASTLLSE LRVRALVFGS SFQRVASCFV QGLANRLSFL  180
QPLGTVGFSA HYTAKFMEVS SEKKEDALGL VYEICPHIQF SHFVANSSIL EAFEGESFVH  240
VLDLGMTLGL PHGHQWRHLI RSLAVHSGPP LLRLRITAVG LYASKFYVIG QELEIYAKSM  300
GINLEFSVVE SSLEDLQPRD ITVYEGEVLV VNSILQLHCV VKESRGALNS VLQMIRELSP  360
KVLVLVEQDS SHNGPFFLGR FMEALHYYSA IFDSLDAMLP KYDTRRAKVE QFYFAEEIKN  420
IVSCEGPARV ERHERVDQWR RRMSRAGFQA APIKMIAQAK QWLKKKNIIE GYTVVEDKGC  480
LLLGWNSKPI IAASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.13e-80GRAS family protein