PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM90614.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 181aa    MW: 20177.7 Da    PI: 6.662
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM90614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM613.8e-19141311109
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL..p.k....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                 lppGfrF+Pt+ee vveyLk+k+ + +l+++ + ++++ y+++P++L  p +     v+ + ++ +fF+++ + +++gk+ +r     yWk+ g+d + 
  OWM90614.1  14 LPPGFRFEPTNEEFVVEYLKRKIFSLPLPASVISDHINPYDTDPRNLlpPpAasggDVD-QGRHFFFFFSKVEDQRKGKKLRR----YYWKTCGTDVDE 107
                 79****************************5445566**********742233332221.34466777777776666666666....59**99985443 PP

         NAM  93 lsk.......kgelvglkktLvfy 109
                  +        +++l+g+k++L+  
  OWM90614.1 108 EQYilspkseNNALMGVKRILIAS 131
                 322333466666669999998755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MISSDDDGGV TRGLPPGFRF EPTNEEFVVE YLKRKIFSLP LPASVISDHI NPYDTDPRNL  60
LPPPAASGGD VDQGRHFFFF FSKVEDQRKG KKLRRYYWKT CGTDVDEEQY ILSPKSENNA  120
LMGVKRILIA SHGAGGENCN NEQASPSPSS SWAVGVGHAR ISPHPYPTYC CCWLLIQLIN  180
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.13e-15NAC family protein