PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM90716.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family BBR-BPC
Protein Properties Length: 287aa    MW: 32325.8 Da    PI: 10.0967
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM90716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind344.82.1e-10512871301
   GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssia.erdaki....rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllal 84 
                 mddd+ + rn+gyyep+  +k +l+lqlmss+a erd+k+    r   + l ++++a+++rd           ++  r+ ++++        ++k+ ++
  OWM90716.1   1 MDDDALNMRNWGYYEPS--FKGHLNLQLMSSMAaERDTKPflsgRGDPTVLVTTNGAYHPRDslvsdtqvpySSY-TREGWMNQ--------REKFYSM 88 
                 9***9999*******99..*************99*********9777777************8877777775556.67777777........7899999 PP

   GAGA_bind  85 llvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesa 183
                 l+       ++p++++vl++t+s +++      q+ + +++lr+ +k+ +++  e++ ++ke+ ++kkrq+++  k++k kk++k +   k+ ++++s+
  OWM90716.1  89 LP-------TNPTNYNVLPETSSEHQSL-----QMLQMPEPLRDDNKMGKPE--EQQAVKKENGQTKKRQSGNALKTPKPKKPRK-P---KDPSTNPSS 169
                 99.......3578999999999887443.....3555566666666665555..5567788888999999999999999999998.2...333444444 PP

   GAGA_bind 184 derskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnp 282
                  +rsk++kks+d+v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmSqgafkk+LekLaaeGy+++np
  OWM90716.1 170 VQRSKQPKKSMDVVINGIDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTQVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANP 268
                 589************************************************************************************************ PP

   GAGA_bind 283 vDLkdhWAkHGtnkfvtir 301
                 +DL++hWAkHGtnkfvtir
  OWM90716.1 269 IDLRTHWAKHGTNKFVTIR 287
                 ******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MDDDALNMRN WGYYEPSFKG HLNLQLMSSM AAERDTKPFL SGRGDPTVLV TTNGAYHPRD  60
SLVSDTQVPY SSYTREGWMN QREKFYSMLP TNPTNYNVLP ETSSEHQSLQ MLQMPEPLRD  120
DNKMGKPEEQ QAVKKENGQT KKRQSGNALK TPKPKKPRKP KDPSTNPSSV QRSKQPKKSM  180
DVVINGIDMD ISGIPIPVCS CTGTPQQCYR WGCGGWQSAC CTTQVSMYPL PMSTKRRGAR  240
IAGRKMSQGA FKKVLEKLAA EGYNFANPID LRTHWAKHGT NKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-101BBR-BPC family protein