PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM91058.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family SBP
Protein Properties Length: 171aa    MW: 19317.7 Da    PI: 9.6243
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM91058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP136.11.1e-4249124277
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                 Cq+e+C adl++a+ yhrrh+vCe h+kapvv+v g++qrfCqqCsrfhelsefD++krsCrrrLa+hnerrrk++
  OWM91058.1  49 CQAEKCPADLTDARPYHRRHRVCELHAKAPVVVVGGMRQRFCQQCSRFHELSEFDDTKRSCRRRLAGHNERRRKSS 124
                 **************************************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MEKAKQRPSK DDKTPKPESE EYEEDDGGEC VKRDPVAGRK GSGSATRGCQ AEKCPADLTD  60
ARPYHRRHRV CELHAKAPVV VVGGMRQRFC QQCSRFHELS EFDDTKRSCR RRLAGHNERR  120
RKSSGEPCAK TSGRKGSGSQ LKEMACGQVD DRGRIQIGIQ ENATYKHFQI R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.15e-46SBP family protein