PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM91149.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 179aa MW: 20904.8 Da PI: 9.9699

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM91149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.8	6.2e-11	102	154	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ h e+Er RR+++N+ ++ Lr+llP + ++K ++ L A YI++ q OWM91149.1 102 KKTRHREIERHRRKEMNTLYASLRSLLPAQ--ILKGKRAVSDQLNVALGYINQIQ 154 6899***********************7..399999999********9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
MPKTCRSNSE HSDFHLQIPN YSFLSQVTMY IQDLILTDYV HPHDHTVFNF SLSSHGQEML 60 GGHEPQLRPN YSLPKPFVSG QTTNDSNKAP EDADVDEENK KKKTRHREIE RHRRKEMNTL 120 YASLRSLLPA QILKGKRAVS DQLNVALGYI NQIQRNIKKL ETERARLKKK GLDKMWYFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	100	115	KKKKTRHREIERHRRK
2	101	116	KKKKTRHREIERHRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51780.1	2e-12	bHLH family protein