PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM91161.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 253aa    MW: 28786.6 Da    PI: 5.1878
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM91161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.4e-20112162255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrd  +   k +r++lg+f+taeeAa a+++a++k++g
  OWM91161.1 112 HYRGVRRRP-WGKYAAEIRDsRR---KGARVWLGTFDTAEEAALAYDKAALKIRG 162
                 7********.**********331...34*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MAIERERAVP EEILENVWAS FIREDKIKPE VTELAETWDE LPRLEQGCGS GDILQRLPSL  60
GRWMSMGAEA WERILEDFYI IPSNKDGKDV GNSDDLLAEK NLARPKKIVA RHYRGVRRRP  120
WGKYAAEIRD SRRKGARVWL GTFDTAEEAA LAYDKAALKI RGPKAYLNFP IETVSKALIK  180
QDCSSTISPR NKYEVSSRKR CVREPELGNG APIISEDQSE SKRRTSVREE SFDDVLEFED  240
LGAELLDSLL SCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.11e-31ERF family protein