PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM91162.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 202aa    MW: 22164.5 Da    PI: 9.3125
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM91162.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-1966117256
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkklege 56 
                 +y+GVr+++ +g+++AeIrd       + +r++lg+f taeeAa a+++a+ k++g+
  OWM91162.1  66 HYRGVRRRP-WGKYAAEIRD----SarQGARIWLGTFETAEEAALAYDRAAFKMRGA 117
                 8********.**********....33334**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MAQSFQIELP LNENDSQDMV IYHVLNEAMS LHGSSIPLQR NYQITATTSS KSALEPTRGI  60
GKSNKHYRGV RRRPWGKYAA EIRDSARQGA RIWLGTFETA EEAALAYDRA AFKMRGAKAL  120
LNFPAEVVAA ATSSSTSSAA AERYQAKSGL ESQNRFDGKD RQSSSSTITF LSDGSRSESE  180
VSNTVGSTDV NSDRVEKKLF EV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.19e-34ERF family protein