PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM91184.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 300aa    MW: 33652.8 Da    PI: 7.932
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM91184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.29.8e-34561961128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyW 83 
                 lp+G++F+P+d+e++ e+L++kv+++       ++  e   +++   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      + +W
  OWM91184.1  56 LPAGVKFDPNDQEIL-EHLEAKVAADArklhplID--EfipTLEGEnGICYTHPEKLP-GVSKDGQVRHFFHRPSKAYTTGTRKRRKVHsdedgsETRW 150
                 799***********9.99****9999856644322..22222333336**********.566677888******************855455555778* PP

         NAM  84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 ++tgk+++vl  +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  OWM91184.1 151 HKTGKTRPVLI-NGTVKGFKKILVLYtnYGRQKKPEKTNWVMHQYHL 196
                 ***********.999***********6658***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MTWCNESEGE RGIQIVSRPF GDHGDGVTVR NVTCPSCGHN IEFENQTGTI HDLPGLPAGV  60
KFDPNDQEIL EHLEAKVAAD ARKLHPLIDE FIPTLEGENG ICYTHPEKLP GVSKDGQVRH  120
FFHRPSKAYT TGTRKRRKVH SDEDGSETRW HKTGKTRPVL INGTVKGFKK ILVLYTNYGR  180
QKKPEKTNWV MHQYHLGSNE EEKDGEMVVS KVFYQTQPRQ CGSIMKEEVD HRKLKGHQGL  240
RESCIAGSTN IVEYFGNQAY NNVSFDSPPQ LIPNLVVHGD GSSSFLRFTT DLGPGKGKMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28470.11e-123NAC family protein