PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM91203.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 228aa    MW: 24223.8 Da    PI: 8.6624
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM91203.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.7e-202271255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                gy+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++a + +++g
  OWM91203.1 22 GYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAKAVEFRG 71
                8********.**********8...557**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MAPRKEEGAR ASGCGGGAGE VGYRGVRKRP WGRYAAEIRD PGKKSRVWLG TFDTAEEAAR  60
AYDAKAVEFR GSKAKTNFPL PAYATIGIDL NSLVHFKAGG GGSSPSQSST VESSGQEPPA  120
AMVDSSPLDL NLAYPGTGFA VALGGGFAGA RGPWPSCFDP MVNSKNMNEQ LYHRLIAFDR  180
RTNTKASAAS SDSDSSSVVN LDDQDRKQER RGLDLNLDLN RPPPPEST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.15e-22ERF family protein