PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM91212.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family SBP
Protein Properties Length: 137aa    MW: 15461.6 Da    PI: 4.6622
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM91212.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP76.83.4e-2477128152
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEET CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhel 52 
                 +Cq+++C++d++eak+yhrrhkvCe+h+ka+vvl++g++qrfCqqCsr  +l
  OWM91212.1  77 TCQADNCTTDMTEAKRYHRRHKVCEFHAKAQVVLIDGIHQRFCQQCSRSETL 128
                 6***********************************************7766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MGSRRNLEDQ KRSFRAVEED EEDEEEEEEE DEEEEEEESE SKRIRAAGVS FSASGKKFGS  60
SSGTSAGGWA STGRATTCQA DNCTTDMTEA KRYHRRHKVC EFHAKAQVVL IDGIHQRFCQ  120
QCSRSETLAI SYNPSTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.12e-21SBP family protein