PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM91225.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 195aa    MW: 22352.2 Da    PI: 9.3217
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM91225.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.2e-111465255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                r+  + +Er+RR++++s f+eL +l+P++   +s+      + L +A +YIk Lq
  OWM91225.1 14 RADRKTIERNRRNHMKSLFSELYSLVPHQ---SSRDvAPLPDQLDEAAKYIKRLQ 65
                677789**********************8...666669999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MERRNPTVSS SSSRADRKTI ERNRRNHMKS LFSELYSLVP HQSSRDVAPL PDQLDEAAKY  60
IKRLQINVEK LREKKQNLLR IESLNSSMRS GMVMDSESSM PHIDIHQTGS ALVVNFVNGW  120
RSCYNYQSLF NKTIRALHEG GAEVINGSFS IVGDRIFSTI HSEVRDSALL STEARISERL  180
HKIFYTDNAE LDYAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.16e-39bHLH family protein