PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM91247.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 273aa MW: 30849.6 Da PI: 6.596

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM91247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.6	9.4e-16	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd +l d++ ++G g+W++I+ g+ R +k+c++rw +yl OWM91247.1 18 KGLWSPEEDRRLRDYILKYGHGCWSSIPINAGLQRNGKSCRLRWTNYL 65 678*******************************************97 PP
2	Myb_DNA-binding	42.8	1.2e-13	72	116	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g T E+e ++ +++ lG++ W+ Ia++++ gRt++++k++w+++l OWM91247.1 72 GMLTVHEEETILILHRFLGNK-WSQIAQHLP-GRTDNEIKNYWHSHL 116 556899*************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MGCKATEKAT KLKTKHRKGL WSPEEDRRLR DYILKYGHGC WSSIPINAGL QRNGKSCRLR 60 WTNYLRPGLK RGMLTVHEEE TILILHRFLG NKWSQIAQHL PGRTDNEIKN YWHSHLKKKV 120 AKPELTEPHT GSSECKSVDA TDSPSLQEPK DDSSISPPKS QADISSLPPS ILFAEWLTLD 180 NNTYNESAHE AGSFSDYYPY LYEDSDLVRT VVCLDSTDCK ANLLGDSFLQ NGNADNGAAF 240 MSDELMIDCT YYKMEDPSSE GKWVPTGGLY LPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25560.1	8e-60	MYB family protein