PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM91321.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 337aa MW: 38389.6 Da PI: 5.622

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM91321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.9	5.6e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++++++G+g+W+ ++ g+ R++k+c++rw +yl OWM91321.1 14 KGPWTPEEDQKLINYIQKHGNGNWRILPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.7	9.5e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ +E+e +++++ lG++ W++Ia++++ gRt++++k++w+++ OWM91321.1 67 RGRFSFDEEEAIIQLHSILGNK-WSAIASRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MGRAPCCDKD GLKKGPWTPE EDQKLINYIQ KHGNGNWRIL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFDEEEAIIQ LHSILGNKWS AIASRLPGRT DNEIKNYWNT HIRKQLLRMG 120 IDPVTHSPRL DLLDLSSILN STLYNSSHHM VNDISTFLQV DPSTNPEILK LATSLGLSQS 180 ENQKCPFQQS QISNCQLQES YHPTDYVQEN LLAHSAVPST NEPNLREPIS RQYQPDFSGL 240 FPISSDNYIY SSEQPGFNPP SENLQDFNLS SNNNNDYQNF SYGASVYSTP SSSPTPLNSN 300 SAYINSGTED EREISYCSKY DLMRYEIPEI LDVNELL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	2e-97	MYB family protein