PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM91371.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 179aa MW: 20003.3 Da PI: 7.5906

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM91371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.4	9.2e-31	105	163	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk+s++pr+YY+Ct gC+vkk+ver+++d ++v++tYeg H+h+ OWM91371.1 105 LDDGFRWRKYGKKSVKNSPNPRNYYKCTNGGCNVKKRVERDRDDSSYVITTYEGVHTHP 163 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
MNFVPAENPN PNYSLFPGNH SDPYPDELGL SDYLILGGGS LLEPSPLLEV KSAPEQVIPM 60 TTLGGSTHTR AADAGIENEN EIEGKRKVGK GCRIAFRTKS EQEILDDGFR WRKYGKKSVK 120 NSPNPRNYYK CTNGGCNVKK RVERDRDDSS YVITTYEGVH THPSPAPFLM HNYNNYAHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	1e-40	WRKY family protein