PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM91400.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 124aa    MW: 14120.2 Da    PI: 9.5214
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM91400.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.91.5e-0783119237
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS- CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskK 37 
                 + +   +Er+RR+++ s ++ Lr++lP  + ka++ K
  OWM91400.1  83 KIMRRDIERQRRQEMASLYQSLRSHLPLkLLKARNYK 119
                 556789*********************9776777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MDYIASTISF DQIDELFQFS TLPYQEHRVD ELDGINFAPL LPSQNVLATA DLLSGPPSVK  60
PQAAPRCIAS ADQNPSKSSE KRKIMRRDIE RQRRQEMASL YQSLRSHLPL KLLKARNYKL  120
VSAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.16e-10bHLH family protein